Biodegradation of a textile dye by Ganoderma lucidum: scale-up into packed-bed bioreactors
DOI:
https://doi.org/10.4025/actascitechnol.v48i1.74839Keywords:
Bactris gasipaes; discolorization; ganoderma lucidum; ligninolytic enzymes; peach palm waste; solid-state fermentation.Abstract
This study presents the scale-up of the discoloration process of the dye Remazol Brilliant Blue R (RBBR) by the white-rot fungus Ganoderma lucidum. Experiments were initially conducted in a 2-L lab-scale bioreactor and subsequently scaled up to a 45-L packed-bed bioreactor operated in batch mode under nonsterile conditions. The dye solution (150 mg L-1) was recirculated through the packed bed, which supported the growth of G. lucidum on an inert and biodegradable carrier — peach palm waste. Discoloration, enzyme activity, pH, and microbial community composition were analyzed. In the lab-scale system, discoloration reached 80%, with laccase activity measured at 847.2 IU mL-1. Upon scale-up, discoloration reached 91%, with laccase identified as the main factor contributing to biodecoloration. The bacterial community was initially dominated by the phylum Proteobacteria (93.4%), followed by an increase in Acidobacteria, Actinobacteria, and Bacteroidetes. Among eukaryotes, Opisthokonta represented over 96% of the community. These results suggest that G. lucidum is a promising agent for the industrial-scale biodegradation of RBBR dye.
Downloads
References
Bates, S. T., Berg-Lyons, D., Caporaso, J. G., Walters, W. A., Knight, R., & Fierer, N. (2011). Examining the global distribution of dominant archaeal populations in soil. The ISME Journal, 5(5), 908–917. https://doi.org/10.1038/ismej.2010.171
Bilal, M., Asgher, M., Parra-Saldivar, R., Hu, H., Wang, W., Zhang, X., & Iqbal, H. M. N. (2017). Immobilized ligninolytic enzymes: An innovative and environmental responsive technology to tackle dye-based industrial pollutants – A review. Science of The Total Environment, 576, 646–659. https://doi.org/10.1016/j.scitotenv.2016.10.137
Bueno, A. M., Hoffmann, T. G., Krebs de Souza, C., de Carvalho, L. F., Bertoli, S. L., Barcellos, I. O., & Gonçalves, M. J. (2022). Optimal process conditions to recycled polyester dyeing using natural annatto dye. Journal of Cleaner Production, 370, 133497. https://doi.org/10.1016/j.jclepro.2022.133497
Cantele, C., Fontana, R. C., Mezzomo, A. G., da Rosa, L. O., Poleto, L., Camassola, M., & Dillon, A. J. P. (2017). Production, characterization and dye decolorization ability of a high level laccase from Marasmiellus palmivorus. Biocatalysis and Agricultural Biotechnology, 12, 15–22. https://doi.org/10.1016/j.bcab.2017.08.012
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., Huttley, G. A., Kelley, S. T., Knights, D., Koenig, J. E., Ley, R. E., Lozupone, C. A., McDonald, D., Muegge, B. D., Pirrung, M., … Knight, R. (2010). QIIME allows analysis of high-throughput community sequencing data. Nature Methods, 7(5), 335–336. https://doi.org/10.1038/nmeth.f.303
Chen, S. H., & Yien Ting, A. S. (2015). Biodecolorization and biodegradation potential of recalcitrant triphenylmethane dyes by Coriolopsis sp. isolated from compost. Journal of Environmental Management, 150, 274–280. https://doi.org/10.1016/j.jenvman.2014.09.014
Chicatto, J. A., Nunes, H. C. A., Gonçalves, M. J., Helm, C. V., Vaz, D. A., & Tavares, L. B. B. (2018a). Strategies for decolorization of textile industry effluents by white-rot-fungi with peach palm residue. Acta Scientiarum - Technology, 40(1), 1–9. https://doi.org/10.4025/actascitechnol.v40i1.35610
Chicatto, J. A., Rainert, K. T., Gonçalves, M. J., Helm, C. V., Altmajer-Vaz, D., & Tavares, L. B. B. (2018b). Decolorization of textile industry wastewater in solid state fermentation with peach-palm (Bactris gasipaes) residue. Brazilian Journal of Biology, 78(4), 718–727. https://doi.org/10.1590/1519-6984.171738
Cole, J. R., Wang, Q., Fish, J. A., Chai, B., McGarrell, D. M., Sun, Y., Brown, C. T., Porras-Alfaro, A., Kuske, C. R., & Tiedje, J. M. (2014). Ribosomal Database Project: Data and tools for high throughput rRNA analysis. Nucleic Acids Research, 42(D1), D633–D642. https://doi.org/10.1093/nar/gkt1244
Das, A., Bhattacharya, S., Panchanan, G., Navya, B. S., & Nambiar, P. (2016). Production, characterization and Congo red dye decolourizing efficiency of a laccase from Pleurotus ostreatus MTCC 142 cultivated on co-substrates of paddy straw and corn husk. Journal of Genetic Engineering and Biotechnology, 14(2), 281–288. https://doi.org/10.1016/j.jgeb.2016.09.007
DeSantis, T. Z., Hugenholtz, P., Larsen, N., Rojas, M., Brodie, E. L., Keller, K., Huber, T., Dalevi, D., Hu, P., & Andersen, G. L. (2006). Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Applied and Environmental Microbiology, 72(7), 5069–5072. https://doi.org/10.1128/AEM.03006-05
Duarte, J. L., Furst, C., Klisiowicz, D. R., Klassen, G., & Costa, A. O. (2013). Morphological, genotypic, and physiological characterization of Acanthamoeba isolates from keratitis patients and the domestic environment in Vitoria, Espírito Santo, Brazil. Experimental Parasitology, 135(1), 9–14. https://doi.org/10.1016/j.exppara.2013.05.013
Edgar, R. C. (2010). Search and clustering orders of magnitude faster than BLAST. Bioinformatics, 26(19), 2460–2461. https://doi.org/10.1093/bioinformatics/btq461
Edgar, R. C. (2013). UPARSE: Highly accurate OTU sequences from microbial amplicon reads. Nature Methods, 10(10), 996–998. https://doi.org/10.1038/nmeth.2604
Fang, Y., Li, Z., Wang, G., Xia, Y., Zhang, K., Gong, W., Yu, E., Xie, W., Li, H., Tian, J., Xie, J., & Xu, Q. (2024). Effects of two fillers and process conditions on the water treatment efficiency of a continuous packed bed biofilm reactor. Letters in Applied Microbiology, 77(7), ovae060. https://doi.org/10.1093/lambio/ovae060
Ghaffar, A., Mehdi, M., Otho, A. A., Tagar, U., Hakro, R. A., & Hussain, S. (2023). Electrospun silk nanofibers for numerous adsorption-desorption cycles on Reactive Black 5 and reuse dye for textile coloration. Journal of Environmental Chemical Engineering, 11(6), 111188. https://doi.org/10.1016/j.jece.2023.111188
Goffredi, S. K., Kantor, A. H., & Woodside, W. T. (2011). Aquatic microbial habitats within a neotropical rainforest: Bromeliads and pH-associated trends in bacterial diversity and composition. Microbial Ecology, 61(3), 529–542. https://doi.org/10.1007/s00248-010-9781-8
Hamady, M., Walker, J. J., Harris, J. K., Gold, N. J., & Knight, R. (2008). Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nature Methods, 5(3), 235–237. https://doi.org/10.1038/nmeth.1184
Hermann, K. L., Costa, T. M., Helm, C. V., Marconatto, L., Borges, L. G. D. A., Vegini, A. A., Giongo, A., & Tavares, L. B. B. (2020). Discoloration of rhodamine b dye by white-rot fungi in solid bleached sulfate paperboard coated with polyethylene terephthalate: Scale-up into non-sterile packed-bed bioreactor. Journal of Environmental Chemical Engineering, 8(3), 103685. https://doi.org/10.1016/j.jece.2020.103685
Hou, H., Zhou, J., Wang, J., Du, C., & Yan, B. (2004). Enhancement of laccase production by Pleurotus ostreatus and its use for the decolorization of anthraquinone dye. Process Biochemistry, 39(11), 1415–1419. https://doi.org/10.1016/S0032-9592(03)00267-X
Javaid, R., Qazi, U. Y., & Kawasaki, S.-I. (2016). Highly efficient decomposition of Remazol Brilliant Blue R using tubular reactor coated with thin layer of PdO. Journal of Environmental Management, 180, 551–556. https://doi.org/10.1016/j.jenvman.2016.05.075
Leung, P.-C., & Pointing, S. B. (2002). Effect of different carbon and nitrogen regimes on Poly R decolorization by white-rot fungi. Mycological Research, 106(1), 86–92. https://doi.org/10.1017/S0953756201005202
Li, X., Xu, J., de Toledo, R. A., & Shim, H. (2015). Enhanced removal of naproxen and carbamazepine from wastewater using a novel countercurrent seepage bioreactor immobilized with Phanerochaete chrysosporium under non-sterile conditions. Bioresource Technology, 197, 465–474. https://doi.org/10.1016/j.biortech.2015.08.118
Liu, Z., Lozupone, C., Hamady, M., Bushman, F. D., & Knight, R. (2007). Short pyrosequencing reads suffice for accurate microbial community analysis. Nucleic Acids Research, 35(18), e120. https://doi.org/10.1093/nar/gkm541
Nolte, V., Pandey, R. V., Jost, S., Medinger, R., Ottenwälder, B., Boenigk, J., & Schlötterer, C. (2010). Contrasting seasonal niche separation between rare and abundant taxa conceals the extent of protist diversity. Molecular Ecology, 19(14), 2908–2915. https://doi.org/10.1111/j.1365-294X.2010.04669.x
Pasko, R. Z., Timm, T. G., de Lima, G. G., Helm, C. V., de Lima, E. A., Henriques, G. S., & Tavares, L. (2022). In vivo evaluation and nutritional quality of by-product subjected to solid state-fermentation using Shiitake culinary-medicinal mushroom Lentinula edodes (Agaricomycetes). International Journal of Medicinal Mushrooms, 24(1), 53–66. https://doi.org/10.1615/intjmedmushrooms.2021041945
Qiu, B., Dang, Y., Cheng, X., & Sun, D. (2013). Decolorization and degradation of cationic red X-GRL by upflow blanket filter. Water Science and Technology, 67(5), 976–982. https://doi.org/10.2166/wst.2013.648
Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P., Peplies, J., & Glöckner, F. O. (2012). The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools. Nucleic Acids Research, 41(D1), D590–D596. https://doi.org/10.1093/nar/gks1219
Ramírez-Cavazos, L. I., Junghanns, C., Nair, R., Cárdenas-Chávez, D. L., Hernández-Luna, C., Agathos, S. N., & Parra, R. (2014). Enhanced production of thermostable laccases from a native strain of Pycnoporus sanguineus using central composite design. Journal of Zhejiang University SCIENCE B, 15(4), 343–352. https://doi.org/10.1631/jzus.B1300246
Rejish Kumar, V. J., Achuthan, C., Manju, N. J., Philip, R., & Bright Singh, I. S. (2009). Activated packed bed bioreactor for rapid nitrification in brackish water hatchery systems. Journal of Industrial Microbiology & Biotechnology, 36(3), 355–365. https://doi.org/10.1007/s10295-008-0504-9
Schmieder, R., & Edwards, R. (2011). Quality control and preprocessing of metagenomic datasets. Bioinformatics, 27(6), 863–864. https://doi.org/10.1093/bioinformatics/btr026
Serbent, M. P., Timm, T. G., Helm, C. V., & Tavares, L. B. B. (2023). Growth, laccase activity and role in 2,4-D degradation of Lentinus crinitus (L.) Fr. in a liquid medium. Biocatalysis and Agricultural Biotechnology, 50, 102682. https://doi.org/10.1016/j.bcab.2023.102682
Solaiman, J. M., Rajamohan, N., Yusuf, M., & Kamyab, H. (2024). Nanocomposite ceramic membranes as novel tools for remediation of textile dye waste water – A review of current applications, machine learning based modeling and future perspectives. Journal of Environmental Chemical Engineering, 12(2), 112353. https://doi.org/10.1016/j.jece.2024.112353
Surana, D., Vinay, Patel, P., Ghosh, P., Sharma, S., Kumar, V., & Kumar, S. (2024). Microplastic fibers in different environmental matrices from synthetic textiles: Ecotoxicological risk, mitigation strategies, and policy perspective. Journal of Environmental Chemical Engineering, 12(2), 112333. https://doi.org/10.1016/j.jece.2024.112333
Suwannawong, P., Khammuang, S., & Sarnthima, R. (2010). Decolorization of Rhodamine B and Congo Red by partial purified laccase from Lentinus polychrous Lév. Journal of Biochemical Technology, 2(3), 182–186.
Timm, T. G., Amâncio, B. R., Loregian, K. E., Magnani, E., Helm, C. V., de Lima, E. A., Marcondes, M. I., Branco, R. H., de Paula, E. M., Benedeti, P. D. B., & Tavares, L. B. B. (2024a). Peach palm shells (Bactris gasipaes Kunth) bioconversion by Lentinula edodes: Potential as new bioproducts for beef cattle feeding. Bioresource Technology, 394, 130292. https://doi.org/10.1016/j.biortech.2023.130292
Timm, T. G., Schipmann, D. B. D., Costa, T. M., & Tavares, L. B. B. (2024b). Remediation of brewery wastewater and reuse for ?-glucans production by basidiomycete fungi. Waste and Biomass Valorization, 15(8), 4629–4645. https://doi.org/10.1007/s12649-024-02468-6
Timm, T. G., Serbent, M. P., & Santiago, J. P. U. (2024c). Fungos basidiomicetos como agentes de micorremediação de solos contaminados. Revista de Estudos Ambientais, 24(2), 97–112. https://doi.org/10.7867/1983-1501.2022v24n2p97-112
Timm, T., Helm, C. V., Alves de Lima, E., Henriques, G. S., Alberton, M. D., Simeone, M. L. F., Queiroz, V. A. V., & Tavares, L. B. B. (2022). Peach palm by-product bioconversion by culinary-medicinal mushroom Lentinula edodes for food products application. International Journal of Medicinal Mushrooms, 24(12), 19–36. https://doi.org/10.1615/intjmedmushrooms.2022045391
van Brenk, B., Kruidhof, L., Kemperman, A. J. B., van der Meer, W. G. J., & Wösten, H. A. B. (2024). Discoloration of textile dyes by spent mushroom substrate of Agaricus bisporus. Bioresource Technology, 402, 130807. https://doi.org/10.1016/j.biortech.2024.130807
Wariishi, H., Valli, K., & Gold, M. H. (1992). Manganese(II) oxidation by manganese peroxidase from the basidiomycete Phanerochaete chrysosporium. Kinetic mechanism and role of chelators. Journal of Biological Chemistry, 267(33), 23688–23695. https://doi.org/10.1016/S0021-9258(18)35893-9
Wery, N., Gerike, U., Sharman, A., Chaudhuri, J. B., Hough, D. W., & Danson, M. J. (2003). Use of a packed-column bioreactor for isolation of diverse protease-producing bacteria from Antarctic soil. Applied and Environmental Microbiology, 69(3), 1457–1464. https://doi.org/10.1128/AEM.69.3.1457-1464.2003
Zeng, G., Cheng, M., Huang, D., Lai, C., Xu, P., Wei, Z., Li, N., Zhang, C., He, X., & He, Y. (2015). Study of the degradation of methylene blue by semi-solid-state fermentation of agricultural residues with Phanerochaete chrysosporium and reutilization of fermented residues. Waste Management, 38, 424–430. https://doi.org/10.1016/j.wasman.2015.01.012
Downloads
Published
How to Cite
Issue
Section
License
Copyright (c) 2025 Juliane Andressa Chicatto, Marcel Jefferson Gonçalves, Thaynã Gonçalves Timm, Cristiane Vieira Helm, Deisi Altmajer-Vaz, Lorena Benathar Ballod Tavares (Autor)

This work is licensed under a Creative Commons Attribution 4.0 International License.
DECLARATION OF ORIGINALITY AND COPYRIGHTS
I Declare that current article is original and has not been submitted for publication, in part or in whole, to any other national or international journal.
The copyrights belong exclusively to the authors. Published content is licensed under Creative Commons Attribution 4.0 (CC BY 4.0) guidelines, which allows sharing (copy and distribution of the material in any medium or format) and adaptation (remix, transform, and build upon the material) for any purpose, even commercially, under the terms of attribution.
Read this link for further information on how to use CC BY 4.0 properly.








8.png)



