Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers

Authors

  • Paulina Ballesta Universidad de Concepción Author
  • Freddy Mora Universidad de Talca Author
  • Rodrigo Ivan Contreras-Soto Universidad de Concepción Author
  • Eduardo Ruiz Universidad de Concepción Author
  • Sandra Perret Ministerio de Agricultura de Chile Author

DOI:

https://doi.org/10.4025/actasciagron.v37i2.19307

Keywords:

DNA pooling, half-sib families, AMOVA, clustering analysis

Abstract

Eucalyptus cladocalyx F. Muell is a tree endemic to southern Australia and is distributed across four isolated regions: Kangaroo Island, southern Flinders Ranges, and two geographical zones in Eyre Peninsula. E. cladocalyx is capable of growing under extreme environmental conditions, including dry and saline soils. The objective of this study was to analyze genetic diversity in 45 half-sib families planted in northern Chile that are distributed across five different zones (provenances). Genetic variability was assessed using ISSR (Inter Simple Sequence Repeat) molecular markers. The results showed low levels of genetic diversity within populations (He = 0.113 to 0.268) in contrast with other Eucalyptus species. In addition, there was a significant genetic differentiation among provenances (Φst = 0.14); populations from the Kangaroo Island provenance showed more differentiation than any other population. These results are in agreement with previous studies of the species. Our study revealed that Chilean resources are a representative sample of Australian populations; therefore, the germplasm planted in northern Chile would be sufficient for the development of improvement programs. ISSR-Marker technology could be an alternative to identify genotypes of interest in material selection.

 

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Author Biography

  • Freddy Mora, Universidad de Talca
    Atualmente, meu trabalho está enfocado à utilização de determinados métodos quantitativos úteis para aprimorar as análises da experimentação agropecuária e florestal, e das etapas de avaliação genética nos programas de melhoramento. Específicamente, estou utilizando a inferência Bayesiana e a metodologia de Modelos Lineares Generalizados (GLM; mistos ou fixos) nas etapas de avaliação genética de plantas/árvores; também estou aplicando uma extensão dos GLM s: Equações de Estimação Generalizada (GEE; Generalized Estimating Equations) na avaliação de cultivares e em outros experimentos com respostas correlacionadas (clusters) e distribuição de erro não-Gaussiana. Computacionalmente, os métodos de pesquisa estão sendo aplicados por meio dos programas nacionais: GENES (Cruz, 1997), GQMOL (Cruz e Schuster, 2001), e SISVAR (Sistema de Análise de Variância; Ferreira, 2003), e internacionais: MTDF-REML (Multi-Trait Derivative Free REML; Boldman et al. 1995), MTGSAM (Multi-Trait Gibbs Sampler for Animal Model; Van-Tassell e Van-Vleck, 1996), e SAS (Statistical Analysis System; SAS Institute, 1996). Currículo Lattes

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Published

2015-05-04

Issue

Section

Genetics and Plant Breeding

How to Cite

Analysis of the genetic diversity of Eucalyptus cladocalyx (sugar gum) using ISSR markers. (2015). Acta Scientiarum. Agronomy, 37(2), 133-140. https://doi.org/10.4025/actasciagron.v37i2.19307

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